International Journal of Engineering
Trends and Technology

Research Article | Open Access | Download PDF

Volume 68 | Issue 10 | Year 2020 | Article Id. IJETT-V68I10P210 | DOI : https://doi.org/10.14445/22315381/IJETT-V68I10P210

A Review of Data Mining Optimization Techniques for Bioinformatics Applications


Preeti Thareja, Rajender Singh Chhillar

Citation :

Preeti Thareja, Rajender Singh Chhillar, "A Review of Data Mining Optimization Techniques for Bioinformatics Applications," International Journal of Engineering Trends and Technology (IJETT), vol. 68, no. 10, pp. 58-62, 2020. Crossref, https://doi.org/10.14445/22315381/IJETT-V68I10P210

Abstract

Geneticists are scaling up their attempts by using a range of investigational and genomics methodologies to understand biological functions. It has ended in a torrent of biomedical and clinical data, that can be daunting for scientists to manage with no adequate resources for information managing and examing, particularly when there is a lack of practice or coding, statistical and simulation expertise. Custom analytics tools have, therefore become highly essential in bioinformatics and can help speed up the research process. This paper provides a comprehensive overview of data mining techniques, methods of optimization and the evolving state of the bioinformatics industry in India.

Keywords

Bioinformatics, Data Mining, Optimization, Validation Metrics, India.

References

[1] J. Liu, "Databases for the Completion of Gene Networks," IEEE Access, vol. 7, pp. 168859–168869, 2019.
[2] K. Huang, Z. Wu, H. Peng, and M. Tsai, "Memetic Particle Gravitation Optimization Algorithm for Solving Clustering Problems," IEEE Access, vol. 7, no. 2, pp. 80950–80968, 2019.
[3] B. Hu et al., "Feature Selection for Optimized High-Dimensional Biomedical Data Using an Improved Shuffled Frog Leaping Algorithm," vol. 15, no. 6, pp. 1765–1773, 2018.
[4] J. M. Zhang, J. Fan, H. C. Fan, D. Rosenfeld, and D. N. Tse, "An interpretable framework for clustering single-cell RNA-Seq datasets," pp. 35–39, 2018.
[5] G. S. Narayana and D. Vasumathi, "An Attributes Similarity-Based K -Medoids Clustering Technique in Data Mining," Arab. J. Sci. Eng., 2017.
[6] F. Huang, X. Li, S. Zhang, and J. Zhang, "Harmonious Genetic Clustering," pp. 1–16, 2017.
[7] R. Al-dalky, K. Taha, D. Homouz, and M. Qasaimeh, "Applying Monte Carlo Simulation to Biomedical Literature to Approximate Genetic Network," vol. 5963, no. c, pp. 1–10, 2015.
[8] R. Suri, "Detecting outliers in categorical data through rough clustering," 2015.
[9] F. Jiang, G. Liu, J. Du, and Y. Sui, "Initialization of K -modes clustering using outlier detection techniques," Inf. Sci. (Ny)., 2015.
[10] U. Maulik et al., "Mining Quasi-Bicliques from HIV-1 – Human Protein Interaction Network : A Multiobjective Biclustering Approach," pp. 1–14, 2012.
[11] C. Wu, I. Khoury, and H. Shah, "Optimizing Medical Data Quality Based on Multiagent Web Service Framework," vol. 16, no. 4, pp. 745–757, 2012.
[12] R. Andonie, "Fuzzy ARTMAP Prediction of Biological Activities for Potential HIV-1 Protease Inhibitors Using a Small Molecular Data Set," vol. 8, no. 1, pp. 80–93, 2011.
[13] A. M. Newman and J. B. Cooper, "AutoSOME : a clustering method for identifying gene expression modules without prior knowledge of cluster number," 2010.
[14] J. Dale, "Multi-objective Optimization Approach to find Biclusters in Gene Expression Data," no. 1.
[15] S. Tapan, D. Wang, S. Member, and A. Self-organizing, "A Further Study on Mining DNA Motifs Using Fuzzy Self-Organizing Maps," vol. 27, no. 1, pp. 113–124, 2016.

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